Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015933988.1_cds_XP_016480138.1_71609
CDS Infomation

[gene=LOC107801341] [db_xref=GeneID:107801341] [protein=protein SNOWY COTYLEDON 3-like isoform X2] [protein_id=XP_016480138.1] [location=complement(join(2527..2610,2726..2833,9225..9314,9441..9557,11806..13404))] [gbkey=CDS]
Sequence

ATGGTGATTGCAGTGTCAATGAGTTGTCAGAATCCGAAAAGGCCGCCATTGCTTCGTTCT
GAAGCTGAAAATGTGCCTCAAAGAAGACCGAAATCGAGAGAGGTTACATCTCGGTACCTA
TCGACATCATCTTCATCTTTTATCTCAACAACGTCATCTTCGAACACAAGTAGTTATTCA
TCATCGTCGGAGTCAATCGCATCACGGCGGAGTCAATCACCGATGGTTACTCGTCCCGTT
GCAACGCCGGTTCAGAATTCCGGTTTGATTAAGCGGTCGCAGTCCGTGGACCGGAGACGG
CCGACGACGCCTGTGACAAGGGAAATGCCTACTGCGGCAAAGATGTTATTGACCTCCACA
AGGAGTTTATCGATTTCGTTTCAAGGTGAGTCGGTTTCATTTCCTGTTAGTAAGAAAAAA
CCTGCTCCTACCTGGAACAATTTGAGTAGTGCGAGGAGAGGTACGCCGGAGCGGAGAAAA
GCTGGACCGGAGTTAGTTACGCCGGCGAATGATCGGGTATTGAGTGATCAACAACGGTGG
CCGGGGAGATTAAAACCGGTGAATTCAAGTTTTCTGACTCGAAGCTTGAATTGTGGCAAC
GAAATACCGAAATTTGGATCCAGAAGTGTACTTAGGTCATTATCAAAATCAGTGATTGAT
GACAATCATGGAGTTAAAATTGCAGCTAAATTGAAACCACAATGTGGTAATGTGGTTAAG
CTCAATGTGAATTCAGATAGTGAAAGTGTTTCATCAGGGAGTACTTCAGGGGTCTATGAA
GGTGGTAATGTCGCTCAAGGGCGAGGCAGTTCCCCTGGTATAGTTGTGCCAGTGAAGTTT
TGGCAAGAGACTAGTAGCAGGATCCGATGCAGGGCGGAACCTGGTTCACCAGTGTCCAAA
AATAGTGGATTGAAAACAGCGGCTCCTTTGAAGCAAATGTCTAATAGGAGAAATTTGATT
GATAGTCCCACACCATCACCTTGGGGTATGCCAGCTTCTAGAGGTTTTGTATCTCCTCTT
CGAGGAGGGGAAAGACCAGCTTCACCAAGTACTGTGGTGGTGCTATCCTCAAATTCTCTA
TCAAGGGGTATGCAAAGTCCAACAAGAACAAGAAATGGTGTTACGGGTACTCCAGCTTCT
AGAGGTTTCGTATCTCCTCTTCGAGGAGGGGCAAAGCCAGCTTCACTAGGTAAGGCAGTG
GCACTATCCTCAAATTCTCTATCAAGGGGTATGCGAAGTCCGACAAGAACAAGAAATGGT
GTTACGGATACTCCATCCACAAATTCTCTATCAAGCGGTACGCAAAGTCCTACAGGAATA
AGAAATGGTGTAATGGCTACACCATCAAAAAATTCTCTATCAAGGGGTATGCCCAGTCCT
ACGAGAATAAGAAATGGTGTTACGCGTACAATACCTAATAATGCTTGCATTATGCCTTCA
AGTTTGAGTTTTGCTGCCGATGCGAGAAGAGGAAAAGCTGGGGAGAATCGTATCAGTGAT
GCACATGAACTGAGGCTACTGAATAATCGGCAAATTCAATGGCGATTTGCCAATGCTAGA
GCCGAAGCTGCTCTAACGTCACAGACAGAGACATCAGAGGTGCCAAGTTTGGAGAATTGG
GATCTGACAGATGGAGATCACTCCAATTCCATGTCAGGAGCTATATGTGCTCTGGAATCA
AGCACTATCCGTCTTCCTGTTGTTGCAGGGGCTGTGGCAGATGTTCAAAATGTGAAATAT
GCTATCTCTTCGGCCGTTGATGTGATGCAGGCAATGGCATCCTCCATTTGTTCTTCACTG
TCAAAGGTTGAGCAGGTGGATTTGTTGGTACATGAGCTTCAAAATGTAGCTGGGAGCGAA
CGTGCTTTGCTTGACCAATGTAGAGATCTCTTGTCATCACTGACAGCTGTACAGGTGAAA
GATTTTAGCCTGAGAACACATTTATTACAAATTAAACGCATGGTTTCTTGCTCTTCAACA
GAAGTAAAAGATGATTAA

Peptide Sequence

PEP ID

XP_016480138.1
PEP Infomation

PREDICTED: protein SNOWY COTYLEDON 3-like isoform X2 [Nicotiana tabacum]
Sequence

MVIAVSMSCQNPKRPPLLRSEAENVPQRRPKSREVTSRYLSTSSSSFISTTSSSNTSSYS
SSSESIASRRSQSPMVTRPVATPVQNSGLIKRSQSVDRRRPTTPVTREMPTAAKMLLTST
RSLSISFQGESVSFPVSKKKPAPTWNNLSSARRGTPERRKAGPELVTPANDRVLSDQQRW
PGRLKPVNSSFLTRSLNCGNEIPKFGSRSVLRSLSKSVIDDNHGVKIAAKLKPQCGNVVK
LNVNSDSESVSSGSTSGVYEGGNVAQGRGSSPGIVVPVKFWQETSSRIRCRAEPGSPVSK
NSGLKTAAPLKQMSNRRNLIDSPTPSPWGMPASRGFVSPLRGGERPASPSTVVVLSSNSL
SRGMQSPTRTRNGVTGTPASRGFVSPLRGGAKPASLGKAVALSSNSLSRGMRSPTRTRNG
VTDTPSTNSLSSGTQSPTGIRNGVMATPSKNSLSRGMPSPTRIRNGVTRTIPNNACIMPS
SLSFAADARRGKAGENRISDAHELRLLNNRQIQWRFANARAEAALTSQTETSEVPSLENW
DLTDGDHSNSMSGAICALESSTIRLPVVAGAVADVQNVKYAISSAVDVMQAMASSICSSL
SKVEQVDLLVHELQNVAGSERALLDQCRDLLSSLTAVQVKDFSLRTHLLQIKRMVSCSST
EVKDD

Transcript Sequence

Gene sequence data has not been registered.